| Package |
CloneSeeker |
| Version |
1.0.16 |
| Date |
2026-02-10 |
| Title |
Seeking and Finding Clones in Copy Number and Sequencing DataAuthors@R: c(person(given = "Mark", family = "Zucker", role = "aut"), person(given = c("Kevin", "R."), family = "Coombes", role = c("aut", "cre"), email = "krc@silicovore.com")) |
| Description |
Defines the classes and functions used to simulate and to analyze data sets describing copy number variants and, optionally, sequencing mutations in order to detect clonal subsets. See Zucker et al. (2019) <doi:10.1093/bioinformatics/btz057>. |
| Depends |
R (>= 3.0) |
| Imports |
methods, graphics, combinat, mc2d, quantmod |
| License |
Apache License (== 2.0) |
| URL |
http://oompa.r-forge.r-project.org/ |
| NeedsCompilation |
no |
| Packaged |
2026-09-22 18:47:07 UTC; KRC |
| Author |
Mark Zucker [aut], Kevin R. Coombes [aut, cre] |
| Maintainer |
Kevin R. Coombes <krc@silicovore.com> |
| Built |
R 4.6.1; ; 2026-09-22 18:48:09 UTC; windows |
| User Manual | CloneSeeker-manual.pdf |
| R CHECK | 00check.log |
| Vignettes |
CloneSeeker.pdf |
![OOMPA logo](../tuba2.gif")