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Mercator

Package Mercator
Version 1.1.7
Date 2025-05-27
Title Clustering and Visualizing Distance MatricesAuthors@R: c(person(given = c("Kevin", "R."), family = "Coombes", role = c("aut", "cre"), email = "krc@silicovore.com"), person(given = c("Caitlin", "E."), family = "Coombes", role = "aut"))
Description Defines the classes used to explore, cluster and visualize distance matrices, especially those arising from binary data. See Abrams and colleagues, 2021, <doi:10.1093/bioinformatics/btab037>.
Depends R (>= 3.5), Thresher (>= 1.1)
Imports methods, stats, utils, graphics, grDevices, KernSmooth, cluster, Rtsne, ClassDiscovery, Polychrome, dendextend, igraph, flexmix, umap, kohonen
VignetteBuilder knitr
Suggests knitr, rmarkdown
License Apache License (== 2.0)
biocViews Clustering
URL http://oompa.r-forge.r-project.org/
NeedsCompilation no
Packaged 2026-09-22 18:26:03 UTC; KRC
Author Kevin R. Coombes [aut, cre], Caitlin E. Coombes [aut]
Maintainer Kevin R. Coombes <krc@silicovore.com>
Built R 4.6.1; ; 2026-09-22 18:27:13 UTC; windows
User ManualMercator-manual.pdf
R CHECK00check.log
Vignettes mercator.html, mercVis.html, umap-som.html