| Package |
Thresher |
| Version |
1.1.5 |
| Date |
2025-04-07 |
| Title |
Threshing and Reaping for Principal ComponentsAuthors@R: c(person(given = c("Kevin", "R."), family = "Coombes", role = c("aut", "cre"), email = "krc@silicovore.com")) |
| Description |
Defines the classes used to identify outliers (threshing) and compute the number of significant principal components and number of clusters (reaping) in a joint application of PCA and hierarchical clustering. See Wang et al., 2018, <doi:10.1186/s12859-017-1998-9>. |
| Depends |
R (>= 4.4), ClassDiscovery, PCDimension |
| Imports |
methods, stats, graphics, grDevices, MASS, colorspace, movMF, ade4, oompaBase |
| Suggests |
NbClust |
| License |
Apache License (== 2.0) |
| biocViews |
Clustering |
| URL |
http://oompa.r-forge.r-project.org/ |
| NeedsCompilation |
no |
| Packaged |
2026-09-22 18:23:16 UTC; KRC |
| Author |
Kevin R. Coombes [aut, cre] |
| Maintainer |
Kevin R. Coombes <krc@silicovore.com> |
| Built |
R 4.6.1; ; 2026-09-22 18:24:20 UTC; windows |
| User Manual | Thresher-manual.pdf |
| R CHECK | 00check.log |
| Vignettes |
Thresher.pdf |
![OOMPA logo](../tuba2.gif")