Supplementary Material for CAMDA 2001 Submission

The bioinformatics section is presenting a talk and a poster at the October 2001 conference on the Critical Assessment of Microarray Data Analysis at Duke University. The text of the talk and the text of the poster are available as Microsoft PowerPoint presentations. The core of the presentation involves separate analyses of the NCI60 data set using the genes on each chromosome and using genes involved in several kinds of biological processes. Since it is not possible to include all of those analyses in a single talk or a single poster, we are making the complete results of the analysis available through this web site.

Analysis by Chromosome
All Genes Dendrogram MDS (No Mosaic) PCA PCANOVA
Chromosome 1 Dendrogram MDS Mosaic PCA PCANOVA
Chromosome 2 Dendrogram MDS Mosaic PCA PCANOVA
Chromosome 3 Dendrogram MDS Mosaic PCA PCANOVA
Chromosome 4 Dendrogram MDS Mosaic PCA PCANOVA
Chromosome 5 Dendrogram MDS Mosaic PCA PCANOVA
Chromosome 6 Dendrogram MDS Mosaic PCA PCANOVA
Chromosome 7 Dendrogram MDS Mosaic PCA PCANOVA
Chromosome 8 Dendrogram MDS Mosaic PCA PCANOVA
Chromosome 9 Dendrogram MDS Mosaic PCA PCANOVA
Chromosome 10 Dendrogram MDS Mosaic PCA PCANOVA
Chromosome 11 Dendrogram MDS Mosaic PCA PCANOVA
Chromosome 12 Dendrogram MDS Mosaic PCA PCANOVA
Chromosome 13 Dendrogram MDS Mosaic PCA PCANOVA
Chromosome 14 Dendrogram MDS Mosaic PCA PCANOVA
Chromosome 15 Dendrogram MDS Mosaic PCA PCANOVA
Chromosome 16 Dendrogram MDS Mosaic PCA PCANOVA
Chromosome 17 Dendrogram MDS Mosaic PCA PCANOVA
Chromosome 18 Dendrogram MDS Mosaic PCA PCANOVA
Chromosome 19 Dendrogram MDS Mosaic PCA PCANOVA
Chromosome 20 Dendrogram MDS Mosaic PCA PCANOVA
Chromosome 21 Dendrogram MDS Mosaic PCA PCANOVA
Chromosome 22 Dendrogram MDS Mosaic PCA PCANOVA
Chromosome X Dendrogram MDS Mosaic PCA PCANOVA


Analysis by Biological Function
oncogenesis Dendrogram MDS Mosaic PCA PCANOVA
death (apoptosis) Dendrogram MDS Mosaic PCA PCANOVA
physiological processes Dendrogram MDS Mosaic PCA PCANOVA
perception of external stimulus Dendrogram MDS Mosaic PCA PCANOVA
ectoderm development Dendrogram MDS Mosaic PCA PCANOVA
mesoderm development Dendrogram MDS Mosaic PCA PCANOVA
cell adhesion Dendrogram MDS Mosaic PCA PCANOVA
cell-cell signaling Dendrogram MDS Mosaic PCA PCANOVA
cell surface receptor linked signal transduction Dendrogram MDS Mosaic PCA PCANOVA
intracellular signaling cascade Dendrogram MDS Mosaic PCA PCANOVA
cell motility Dendrogram MDS Mosaic PCA PCANOVA
cell organization and biogenesis Dendrogram MDS Mosaic PCA PCANOVA
cell proliferation Dendrogram MDS Mosaic PCA PCANOVA
stress response Dendrogram MDS Mosaic PCA PCANOVA
radiation response Dendrogram MDS Mosaic PCA PCANOVA
cell cycle Dendrogram MDS Mosaic PCA PCANOVA
nucleobase, nucleoside, nucleotide and nucleic acid metabolism Dendrogram MDS Mosaic PCA PCANOVA
protein metabolism and modification Dendrogram MDS Mosaic PCA PCANOVA
cell shape and cell size control Dendrogram MDS Mosaic PCA PCANOVA
intracellular protein traffic Dendrogram MDS Mosaic PCA PCANOVA
transport Dendrogram MDS Mosaic PCA PCANOVA
lipid metabolism Dendrogram MDS Mosaic PCA PCANOVA
carbohydrate metabolism Dendrogram MDS Mosaic PCA PCANOVA
energy pathways Dendrogram MDS Mosaic PCA PCANOVA